The Peptide CommonsEst. May 2024
Independent. We sell nothing and are affiliated with no manufacturer or pharmacy. Every moderation action is logged in public
Topic summary

Reading a chromatogram someone posted without axes

This is a generated summary. It shows the 8 most-liked posts from a topic of 56, in their original order, with the accepted answer included where one exists. It is a reading aid and it will miss nuance — the full topic is the record.
AZ
a.zamoraTL21 Feb 2025#1

Reading a chromatogram someone posted without axes — setting out what I have, and where I think it stops being reliable.

Posting a small dataset on reading a chromatogram. It is mine, it is uncontrolled, and the method is stated so it can be discounted appropriately.

What I would like is not agreement but a second dataset collected by someone with no stake in mine. If one exists I would rather read it than argue for this one.

50 likes 18mo
YR
y.ramosTL211 Mar 2025#10

Confirming post #7 from a second method, which matters more than confirming it from a second person.

System suitability testing: injections run before and during the sample run to establish whether the instrument, column and method were performing when the sample was analysed. If suitability did not pass, the sample results from that run are uninterpretable.

26 likes 17mo
B
BDraganovTL2Member15 Mar 2025#11
a.zamora, post #1: Reading a chromatogram someone posted without axes — setting out what I have, and where I think it stops being reliable. Posting a small dataset on reading a chromatogram. It is mine, it is uncontrolled, and the method is stated so it can be discounted appropriately. What I would like is not agreement but a second dataset collected by… Go to post

Following this. I have the same question and no better information than the first post.

32 likes in reply to #1 16mo
MH
ms_hollowayTL4Mass spectrometrist19 Apr 2025#23

Injection volume matters because column overload distorts peak shape, and an overloaded main peak can swallow a small neighbour. A certificate without injection volume is missing something load-bearing.

26 likes 15mo
M
MSaarinenTL3Regular23 May 2025#36
f.lindholm, post #8: Narrowing post #7, because the general version has more than one answer. Having read the whole reading a chromatogram thread before replying: the question in the first post has not actually been answered yet, and three of us have answered a nearby one instead. Go to post

Right — I had this wrong and I am glad to have read it before it mattered.

27 likes in reply to #8 14mo
F
FairweatherTL2Member21 Jun 2025#48
integrator_trace, post #15: If someone has run reading a chromatogram properly I would rather read that than my own reconstruction of it. Posting mine only because the thread has gone quiet. Go to post

Picking up post #46: that is the part I would want checked first.

Gradient delay volume differs between instruments and shifts the whole chromatogram. It is why a transferred method rarely reproduces retention times exactly on a different system.

29 likes in reply to #15 13mo
RP
r.petrovTL227 Jun 2025#51
t.kulkarni, post #42: Before anything else: what was the gradient, and at what wavelength? Area percent at different wavelengths is not the same number even on the same sample because different species absorb differently at different wavelengths. With the method stated, I can tell you something useful. Without it, all I can say is that there is one large peak. Go to post

My understanding of reading a chromatogram is a few years old and may have been superseded. If it has been, I would genuinely like to know rather than keep repeating it.

22 likes in reply to #42 13mo
C
chromatogramTL4Analytical chemist9 Jul 2025#56
y.ramos, post #10: Confirming post #7 from a second method, which matters more than confirming it from a second person. System suitability testing: injections run before and during the sample run to establish whether the instrument, column and method were performing when the sample was analysed. If suitability did not pass, the sample results from that… Go to post

Gradient slope is the single biggest driver of apparent purity differences. A shallower gradient over a longer run resolves more impurities and gives a higher purity figure. A steep gradient produces a tidier-looking chromatogram with fewer visible peaks and gives a lower purity figure. Both are legitimate methods and they will not produce the same number.

The number is defensible. The precision I gave it is not.

30 likes in reply to #10 13mo

Read the full topic (56 posts)

Suggested topics

TopicParticipantsRepliesViewsActivity
Why I ask for the gradient before I discuss the number
The question in the title: Why I ask for the gradient before I discuss the number I will give what I have already checked below so nobody repeats it. I would like to understand what this number means before I…
GPSFCNNDHK+35 39 4.9k 20mo
Second pass at: What a reversed-phase purity number actually is
On the subject in the title: Second pass at: What a reversed-phase purity number actually is Working notes rather than a conclusion. I would like to understand what this number means before I repeat it…
JTSPNS 2 7.4k 11mo
Coming back to: Column chemistry choices for a 40-residue peptide
On the subject in the title: Column chemistry choices for a 40-residue peptide Working notes rather than a conclusion. Column chemistry choices — I have the observation and I do not trust my interpretation of…
MLFPHB 2 43k 16mo
Column chemistry choices for a 40-residue peptide
Column chemistry choices for a 40-residue peptide — setting out what I have, and where I think it stops being reliable. Collecting what is known about column chemistry choices in one place, because it is…
SRDWZVGLCV+39 43 1.1k 10mo
What a reversed-phase purity number actually is — the long version
What a reversed-phase purity number actually is — the long version I have a specific reason for asking rather than idle curiosity, and the context is below. I would like to understand what this number means…
MAMMC 2 15k 8mo

Related topics — sharing the tags HPLC, UV & DAD detection, gradient method

TopicParticipantsRepliesViewsActivity
Area percent versus weight percent: the confusion that causes most arguments
Posting this under the heading it deserves: Area percent versus weight percent: the confusion that causes most arguments Everything below is what sits behind that. Proposing that area percent versus weight…
ADSVCDFNAD+10 14 2.1k 2mo
Coming back to: Why the cheapest option is often not the cheapest
Why the cheapest option is often not the cheapest — that is the question, and I have not found it answered plainly anywhere I have looked. Reading back through what has been written here about cheapest…
DADVDBRMMP+21 25 55k 13mo
Ultrasound and skinfolds: operator dependence in practice — what changed since
Posting this under the heading it deserves: Ultrasound and skinfolds: operator dependence in practice — what changed since Everything below is what sits behind that. What changes if the standard account of…
BJAVTKPNRV+32 37 7.4k 3mo
Follow-up: Attributing a new peak: degradation product or excipient?
Attributing a new peak: degradation product or excipient? I have a specific reason for asking rather than idle curiosity, and the context is below. A follow-up question about Attributing a new peak that I did…
KIABCSGV+15 19 671 17mo
Injection volume, overload, and peak distortion — one year on
Injection volume, overload, and peak distortion — one year on Writing it up because I had to work it out twice and would rather nobody else did. Posting a small dataset on Injection volume. It is mine, it is…
DTCNFEGFZV+4 8 1.2k 4mo